Adding Differential Abundancce Results to C3NA Object

Source: R/miscFunctions.r

Adding the DA results (run separately from C3NA required pipeline) to C3NA objects.

addDAResults(
  twoPhenoC3NAObj = twoPhenoC3NAObj,
  DAResults = NULL,
  verbose = TRUE
)

Arguments

twoPhenoC3NAObj

(Required) C3NA objects after running comparePhenotypes()

DAResults

(Required) Differential abundance results, should have a 'TaxaName' column with any number of DA methods results. To ensure the data are selected correctly, only the logical (TRUE/FALSE) columns will be included. Please ensure the columns are reflect the correct type.

verbose

(Optional) If TRUE, the function will display how many number of taxa that shared or unique from the DA and C3NA pipeline.